Package: esci 1.0.4

Robert Calin-Jageman

esci: Estimation Statistics with Confidence Intervals

A collection of functions and 'jamovi' module for the estimation approach to inferential statistics, the approach which emphasizes effect sizes, interval estimates, and meta-analysis. Nearly all functions are based on 'statpsych' and 'metafor'. This package is still under active development, and breaking changes are likely, especially with the plot and hypothesis test functions. Data sets are included for all examples from Cumming & Calin-Jageman (2024) <ISBN:9780367531508>.

Authors:Robert Calin-Jageman [aut, cre, cph]

esci_1.0.4.tar.gz
esci_1.0.4.zip(r-4.5)esci_1.0.4.zip(r-4.4)esci_1.0.4.zip(r-4.3)
esci_1.0.4.tgz(r-4.4-any)esci_1.0.4.tgz(r-4.3-any)
esci_1.0.4.tar.gz(r-4.5-noble)esci_1.0.4.tar.gz(r-4.4-noble)
esci_1.0.4.tgz(r-4.4-emscripten)esci_1.0.4.tgz(r-4.3-emscripten)
esci.pdf |esci.html✨
esci/json (API)
NEWS

# Install 'esci' in R:

install.packages('esci', repos = c('https://rcalinjageman.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rcalinjageman/esci/issues

Datasets:

data_altruism_happiness - Altruism Happiness - Ch12 - from Brethel-Haurwitz and Marsh
data_anchor_estimate_ma - Anchor Estimate ma - Ch9 - Many Labs replications of Jacowitz and Kahneman
data_basol_badnews - Basol badnews - Ch07 - from Basol et al.
data_bem_psychic - Bem Psychic - Ch13 - from Bem and Honorton
data_bodywellf - BodyWellF - Ch12 - Body Satisfaction and Well-being data for females from Figure 11.24 right panel
data_bodywellfm - BodyWellFM - Ch12 - Body Satisfaction and Well-being data from Figure 11.1
data_bodywellm - BodyWellM - Ch12 - Body Satisfaction and Well-being data for males from Figure 11.24 left panel
data_campus_involvement - Campus Involvement - Ch11 - for End-of-Chapter Exercise 11.7
data_chap_8_paired_ex_8.18 - _Fictitious_ data from an unrealistically small HEAT study comparing scores for a single group of students before and after a workshop on climate change.
data_clean_moral - Clean moral - Ch07 - from Schnall et al.
data_college_survey_1 - College survey 1 - Ch03 - for End-of-Chapter Exercise 3.3
data_college_survey_2 - College survey 2 - Ch05 - for End-of-Chapter Exercise 5.4
data_damischrcj - DamischRCJ - Ch9 - from 6 Damisch studies, and Calin-Jageman and Caldwell
data_effronraj_fakenews - EffronRaj fakenews - Ch8 - from Effron and Raj
data_emotion_heartrate - Emotion heartrate - Ch8 - from Lakens
data_exam_scores - Exam Scores - Ch11 - for End-of-Chapter Exercise 11.2
data_flag_priming_ma - Flag Priming ma - Ch9 - Many Labs replications of Carter et al.
data_gender_math_iat - Gender math IAT - Ch07 - Ithaca and SDSU replications of Nosek et al.
data_gender_math_iat_ma - Gender math IAT ma - Ch9 - Many Labs replications of Nosek et al.
data_halagappa - Halagappa - Ch14 - from Halagappa et al.
data_home_prices - Home Prices - Ch12 - for End-of-Chapter Exercise 12.2
data_kardas_expt_3 - Kardas Expt 3 - Ch07 - from Kardas and O'Brien (2018), Experiment 3
data_kardas_expt_4 - Kardas Expt 4 - Ch07 - from Kardas and O'Brien (2018), Experiment 4
data_labels_flavor - Labels flavor - Ch8 - from Floretta-Schiller et al.
data_latimier_3groups - Latimier 3Groups - Ch14 - 3 groups in Latimier et al.
data_latimier_prequiz - Latimier Prequiz - Ch03 - Prequiz group in Latimier et al.
data_latimier_quiz - Latimier Quiz - Ch03 - Quiz group in Latimier et al.
data_latimier_quiz_prequiz - Latimier Quiz Prequiz - Ch07 - Quiz and Prequiz groups in Latimier et al.
data_latimier_reread - Latimier Reread - Ch03 - Reread group in Latimier et al.
data_latimier_reread_prequiz - Latimier Reread Prequiz - Ch07 - Reread and Prequiz groups in Latimier et al.
data_latimier_reread_quiz - Latimier Reread Quiz - Ch07 - Reread and Quiz groups in Latimier et al.
data_macnamara_r_ma - Macnamara r ma - Ch11 - from Macnamara et al.
data_mccabemichael_brain - McCabeMichael brain - Ch9 - from Michael et al.
data_mccabemichael_brain2 - McCabeMichael brain2 - Ch9 - from Michael et al.
data_meditationbrain - MeditationBrain - Ch15 - from Holzel et al.
data_organicmoral - OrganicMoral - Ch14 - from Eskine
data_penlaptop1 - % transcription scores from pen and laptop group of Meuller et al., 2014
data_powerperformance_ma - PowerPerformance ma - Ch9 - from Burgmer and Englich
data_rattanmotivation - RattanMotivation - Ch14 - from Rattan et al.
data_religionsharing - ReligionSharing - Ch14 - *RETRACTED DATA* used in End-of-Chapter Exercise 14.3
data_religious_belief - Religious belief - Ch03 - for End-of-Chapter Exercise 3.5
data_selfexplain - SelfExplain - Ch15 - from McEldoon et al.
data_simmonscredibility - SimmonsCredibility - Ch14 - from Simmons and Nelson
data_sleep_beauty - Sleep Beauty - Ch11 - for End-of-Chapter Exercise 11.6
data_smithrecall - SmithRecall - Ch15 - from Smith et al.
data_stickgold - Stickgold - Ch06 - from Stickgold et al.
data_studystrategies - StudyStrategies - Ch14 - from O'Reilly et al.
data_thomason_1 - Thomason 1 - Ch11 - from Thomason 1
data_videogameaggression - VideogameAggression - Ch15 - from Hilgard

On CRAN:

jamovi jasp science statistics visualization

59 exports 19 stars 2.36 score 76 dependencies 10 scripts 257 downloads

Last updated 6 days agofrom:91494cb289. Checks:OK: 7. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Sep 12 2024
R-4.5-win	OK	Sep 12 2024
R-4.5-linux	OK	Sep 12 2024
R-4.4-win	OK	Sep 12 2024
R-4.4-mac	OK	Sep 12 2024
R-4.3-win	OK	Sep 12 2024
R-4.3-mac	OK	Sep 12 2024

Exports:CI_diamond_ratio CI_smd_ind_contrast CI_smd_one esci_plot_difference_axis_x estimate_magnitude estimate_mdiff_2x2_between estimate_mdiff_2x2_mixed estimate_mdiff_ind_contrast estimate_mdiff_one estimate_mdiff_paired estimate_mdiff_two estimate_pdiff_ind_contrast estimate_pdiff_one estimate_pdiff_paired estimate_pdiff_two estimate_proportion estimate_r estimate_rdiff_two geom_meta_diamond_h jamovicorrelation jamovidescribe jamovimagnitude jamovimdiff2x2 jamovimdiffindcontrast jamovimdiffpaired jamovimdifftwo jamovimetamdiff jamovimetamean jamovimetapdiff jamovimetaproportion jamovimetar jamovipdiffpaired jamovipdifftwo jamoviproportion jamovirdifftwo meta_any meta_d1 meta_d2 meta_mdiff_two meta_mean meta_pdiff_two meta_proportion meta_r overview overview_nominal plot_correlation plot_describe plot_interaction plot_magnitude plot_mdiff plot_meta plot_pdiff plot_proportion plot_rdiff plot_scatter test_correlation test_mdiff test_pdiff test_rdiff

Dependencies:base64enc beeswarm cli codetools colorspace commonmark contfrac curl deSolve distributional elliptic fansi farver generics ggbeeswarm ggdist ggh4x ggplot2 ggtext glue gridtext gtable hypergeo isoband jmvcore jpeg jsonlite labeling lattice lifecycle magrittr markdown MASS mathjaxr Matrix metadat metafor mgcv mnonr moments multcomp munsell mvtnorm nlme numDeriv orthopolynom pbapply PDQutils pillar pkgconfig png polynom quadprog R6 rbibutils RColorBrewer Rcpp Rdpack rlang sadists sandwich scales statpsych stringi stringr survival TH.data tibble utf8 vctrs vipor viridisLite withr xfun xml2 zoo

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Estimate the diamond ratio for a meta-analytic effect, a measure of heterogeneity	CI_diamond_ratio
Estimate standardized mean difference (Cohen's d) for an independent groups contrast	CI_smd_ind_contrast
Estimate standardized mean difference (Cohen's d1) for a single group	CI_smd_one
Altruism Happiness - Ch12 - from Brethel-Haurwitz and Marsh (2014)	data_altruism_happiness
Anchor Estimate ma - Ch9 - Many Labs replications of Jacowitz and Kahneman (1995)	data_anchor_estimate_ma
Basol badnews - Ch07 - from Basol et al. (2020)	data_basol_badnews
Bem Psychic - Ch13 - from Bem and Honorton (1994)	data_bem_psychic
BodyWellF - Ch12 - Body Satisfaction and Well-being data for females from Figure 11.24 right panel	data_bodywellf
BodyWellFM - Ch12 - Body Satisfaction and Well-being data from Figure 11.1	data_bodywellfm
BodyWellM - Ch12 - Body Satisfaction and Well-being data for males from Figure 11.24 left panel	data_bodywellm
Campus Involvement - Ch11 - for End-of-Chapter Exercise 11.7	data_campus_involvement
_Fictitious_ data from an unrealistically small HEAT study comparing scores for a single group of students before and after a workshop on climate change.	data_chap_8_paired_ex_8.18
Clean moral - Ch07 - from Schnall et al. (2008), Study 1, and Johnson et al. (2014)	data_clean_moral
College survey 1 - Ch03 - for End-of-Chapter Exercise 3.3	data_college_survey_1
College survey 2 - Ch05 - for End-of-Chapter Exercise 5.4	data_college_survey_2
DamischRCJ - Ch9 - from 6 Damisch studies, and Calin-Jageman and Caldwell (2014)	data_damischrcj
EffronRaj fakenews - Ch8 - from Effron and Raj (2020)	data_effronraj_fakenews
Emotion heartrate - Ch8 - from Lakens (2013)	data_emotion_heartrate
Exam Scores - Ch11 - for End-of-Chapter Exercise 11.2	data_exam_scores
Flag Priming ma - Ch9 - Many Labs replications of Carter et al. (2011)	data_flag_priming_ma
Gender math IAT - Ch07 - Ithaca and SDSU replications of Nosek et al. (2002)	data_gender_math_iat
Gender math IAT ma - Ch9 - Many Labs replications of Nosek et al. (2002)	data_gender_math_iat_ma
Halagappa - Ch14 - from Halagappa et al. (2007)	data_halagappa
Home Prices - Ch12 - for End-of-Chapter Exercise 12.2	data_home_prices
Kardas Expt 3 - Ch07 - from Kardas and O'Brien (2018), Experiment 3	data_kardas_expt_3
Kardas Expt 4 - Ch07 - from Kardas and O'Brien (2018), Experiment 4	data_kardas_expt_4
Labels flavor - Ch8 - from Floretta-Schiller et al. (2015)	data_labels_flavor
Latimier 3Groups - Ch14 - 3 groups in Latimier et al. (2019)	data_latimier_3groups
Latimier Prequiz - Ch03 - Prequiz group in Latimier et al. (2019)	data_latimier_prequiz
Latimier Quiz - Ch03 - Quiz group in Latimier et al. (2019)	data_latimier_quiz
Latimier Quiz Prequiz - Ch07 - Quiz and Prequiz groups in Latimier et al. (2019)	data_latimier_quiz_prequiz
Latimier Reread - Ch03 - Reread group in Latimier et al. (2019)	data_latimier_reread
Latimier Reread Prequiz - Ch07 - Reread and Prequiz groups in Latimier et al. (2019)	data_latimier_reread_prequiz
Latimier Reread Quiz - Ch07 - Reread and Quiz groups in Latimier et al. (2019)	data_latimier_reread_quiz
Macnamara r ma - Ch11 - from Macnamara et al. (2014)	data_macnamara_r_ma
McCabeMichael brain - Ch9 - from Michael et al. (2013)	data_mccabemichael_brain
McCabeMichael brain2 - Ch9 - from Michael et al. (2013)	data_mccabemichael_brain2
MeditationBrain - Ch15 - from Holzel et al. (2011)	data_meditationbrain
OrganicMoral - Ch14 - from Eskine (2013)	data_organicmoral
% transcription scores from pen and laptop group of Meuller et al., 2014	data_penlaptop1
PowerPerformance ma - Ch9 - from Burgmer and Englich (2012), and Cusack et al. (2015)	data_powerperformance_ma
RattanMotivation - Ch14 - from Rattan et al. (2012)	data_rattanmotivation
ReligionSharing - Ch14 - RETRACTED DATA used in End-of-Chapter Exercise 14.3	data_religionsharing
Religious belief - Ch03 - for End-of-Chapter Exercise 3.5	data_religious_belief
SelfExplain - Ch15 - from McEldoon et al. (2013)	data_selfexplain
SimmonsCredibility - Ch14 - from Simmons and Nelson (2020)	data_simmonscredibility
Sleep Beauty - Ch11 - for End-of-Chapter Exercise 11.6	data_sleep_beauty
SmithRecall - Ch15 - from Smith et al. (2016)	data_smithrecall
Stickgold - Ch06 - from Stickgold et al. (2000)	data_stickgold
StudyStrategies - Ch14 - from O'Reilly et al. (1998)	data_studystrategies
Thomason 1 - Ch11 - from Thomason 1	data_thomason_1
VideogameAggression - Ch15 - from Hilgard (2015)	data_videogameaggression
Add a difference axis to the x axis of an esci forest plot	esci_plot_difference_axis_x
Estimates for a continuous variable with no grouping (single-group design)	estimate_magnitude
Estimates for a 2x2 between-subjects design with a continuous outcome variable	estimate_mdiff_2x2_between
Estimates for a 2x2 mixed factorial design with a continuous outcome variable	estimate_mdiff_2x2_mixed
Estimates for a multi-group design with a continuous outcome variable	estimate_mdiff_ind_contrast
Estimates for a single-group design with a continuous outcome variable compared to a reference or population value	estimate_mdiff_one
Estimates for a repeated-measures study with two measures of a continuous variable	estimate_mdiff_paired
Estimates for a two-group study with a continuous outcome variable	estimate_mdiff_two
Estimates for a multi-group study with a categorical outcome variable	estimate_pdiff_ind_contrast
Estimates for a single-group design with a categorical outcome variable compared to a reference or population value.	estimate_pdiff_one
Estimates for a repeated-measures study with two measures of a categorical variable	estimate_pdiff_paired
Estimates for a two-group study with a categorical outcome variable	estimate_pdiff_two
Estimates for a categorical variable with no grouping (single-group design)	estimate_proportion
Estimates the linear correlation (Pearson's r) between two continuous variables	estimate_r
Estimates the difference in correlation for a design with two groups and two continuous outcome variables	estimate_rdiff_two
Meta-analysis diamond	geom_meta_diamond_h
Correlations: Single Group	jamovicorrelation
Describe	jamovidescribe
Means and Medians: Single Group	jamovimagnitude
Means and Medians: 2x2 Factorial	jamovimdiff2x2
Means and Medians: Independent Groups Contrast	jamovimdiffindcontrast
Means and Medians: Paired	jamovimdiffpaired
Means and Medians: Two Groups	jamovimdifftwo
Meta-Analysis: Difference in Means	jamovimetamdiff
Meta-Analysis: Means	jamovimetamean
Meta-Analysis: Difference in Proportions	jamovimetapdiff
Meta-Analysis: Proportions	jamovimetaproportion
Meta-Analysis: Correlations	jamovimetar
Proportions: Paired	jamovipdiffpaired
Proportions: Two Groups	jamovipdifftwo
Proportions: Single Group	jamoviproportion
Correlations: Two Groups	jamovirdifftwo
Estimate any meta effect.	meta_any
Estimate a meta-analytic Cohen's d1 across multiple studies	meta_d1
Estimate meta-analytic standardized mean difference across multiple two group studies (all paired, all independent, or a mix).	meta_d2
Estimate meta-analytic difference in means across multiple two-group studies.	meta_mdiff_two
Estimate a meta-analytic mean across multiple single-group studies.	meta_mean
Estimate meta-analytic difference in proportions over multiple studies with two independent groups and a categorical outcome variable.	meta_pdiff_two
Estimate a meta-analytic proportion of outcomes over multiple studies with a categorical outcome variable.	meta_proportion
Estimate meta-analytic Pearson's r across multiple studies with two continuous outcome variables.	meta_r
Calculates descriptive statistics for a continuous variable	overview
Calculates descriptive statistics for a numerical variable	overview_nominal
Plot an estimated Pearson's r value	plot_correlation
Plot a histogram or dotplot of an estimated magnitude with raw data	plot_describe
Plot the interaction from a 2x2 design	plot_interaction
Plot the mean or median for a continuous variable	plot_magnitude
Plots for comparing continuous outcome variables between conditions	plot_mdiff
Generates a forest plot displaying results of a meta-analysis	plot_meta
Plots for comparing categorical outcome variables between conditions	plot_pdiff
Plot an estimated proportion	plot_proportion
Plots for comparing Pearson _r_ values between conditions	plot_rdiff
Generates a scatter plot of data for two continuous variables	plot_scatter
Print an esci_estimate	print.esci_estimate
Test a hypothesis about the strength of a Pearson's _r_ correlation	test_correlation
Test a hypothesis about a difference in a continuous outcome variable.	test_mdiff
Test a hypothesis about a difference in proportion	test_pdiff
Test a hypothesis about a difference in correlation strength	test_rdiff